Main Characteristics

  • High Performance
    The command line version of Blast2GO allows you to analyze large datasets on your own computing servers without a graphical user interface.
  • Flexible
    Easily integrate your functional annotation tasks within your custom analysis pipeline and run different analysis scenarios in parallel.
  • Automatic Data Generation
    Generate all the statistics charts Blast2GO offers in an automatic fashion. This includes a PDF summary report, as well as different images and text files.
  • Reproducibility
    Control the whole analysis with a simple configuration file. This allows you to set up different analysis strategies and to reproduce multiple scenarios for one or various datasets.
  • Secure
    Run BLAST, InterProScan and the Blast2GO annotation offline, on your own servers, according to your security requirements. Take 100% control of data sources and versions you use throughout the analysis.