Main Features

  • Perform Blast, in the cloud or locally, directly from the Blast2GO Command Line
  • Perform InterProScan, in the cloud or publicly through EBI (both need an internet connection)
  • Easy GO database setup and updates with MongoDB
  • Run Blast2GO CLI on your own servers and control all analysis steps from the command line
  • Automate your functional annotation
  • Reproduce your results in a consistent manner
  • Handle hundreds of thousands of sequences
  • Design advanced annotation strategies
  • Integrate Blast2GO into your existing analysis pipelines
  • Import BLAST and InterProScan results obtained outside Blast2GO
  • Automatically generate PDF reports
  • Work consistent and effectively once you defined the right settings for your analysis